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Chst14 Gene Detail
 Symbol
Name
ID
Chst14
carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14
MGI:1919386


Nomenclature History
Synonyms 2600016L03Rik, D4ST-1, D4st1
Genetic Map
Chromosome 2
cytoband E5
 
Mapping data( 3)
Sequence Map
Chr2:118752232-118754321 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF325581
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000015639 VEGA Gene Model | MGI Sequence Detail 2090 C57BL/6J ± Kb
transcript NM_028117 RefSeq | MGI Sequence Detail 2089 -
polypeptide Q80V53 UniProt | EBI | MGI Sequence Detail 376 Not Applicable
For the selected sequences
All sequences(25)
Alleles
and
phenotypes
All alleles(1) : Targeted, knock-out(1)
Polymorphisms SNPs within 2kb(14 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process carbohydrate biosynthetic process, carbohydrate metabolic process...
Component Golgi apparatus, integral to membrane...
Function N-acetylgalactosamine 4-O-sulfotransferase activity, protein binding...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (3)    Results (17)    Tissues (11)    Images (8)
Theiler Stages: 21,24,28
  Assay Type Assays   Results
      RT-PCR 1   2
      RNA in situ 2   15
cDNA source data(34)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(37) Genomic(1) cDNA(35) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000074916
DoTS DT.101389415, DT.490503
Consensus CDS Project CCDS16587.1
UniGene 278349
DFCI TC1576618
NIA Mouse Gene Index U002292
Entrez Gene 72136
VEGA Gene Model OTTMUSG00000015639
International Mouse Knockout Project Status Chst14
Protein
domains
InterPro ID Description
IPR005331 Sulfotransferase
IPR018011 Carbohydrate sulfotransferase-related
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:133424 Akita K et al., "Expression of multiple chondroitin/dermatan sulfotransferases in the neurogenic regions of the embryonic and adult central nervous system implies that complex chondroitin sulfates have a role in neural stem cell maintenance." Stem Cells 2008 Mar;26(3):798-809
All references(8)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory