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Pomgnt1 Gene Detail
 Symbol
Name
ID
Pomgnt1
protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase
MGI:1915523


Nomenclature History
Synonyms 0610016I07Rik, 4930467B06Rik
Genetic Map
Chromosome 4
cytoband C7
 
Mapping data( 2)
Sequence Map
Chr4:115796445-115832454 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF320555
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000009309 VEGA Gene Model | MGI Sequence Detail 36010 C57BL/6J ± Kb
transcript NM_026651 RefSeq | MGI Sequence Detail 2736 C57BL/6
polypeptide Q91X88 UniProt | EBI | MGI Sequence Detail 660 Not Applicable
For the selected sequences
All sequences(39)
Alleles
and
phenotypes
All alleles(32) : Targeted, knock-out(1) Gene trapped(31)
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (2)  
Polymorphisms SNPs within 2kb(82 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(13)
Process protein amino acid N-linked glycosylation, protein amino acid O-linked glycosylation...
Component Golgi apparatus, Golgi membrane...
Function alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity...
External Resources: MouseFunc
Expression Literature Summary: (1 records)
Data Summary: Assays (1)    Results (5)    Tissues (5)
Theiler Stages: 28
  Assay Type Assays   Results
      RT-PCR 1   5
cDNA source data(98)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(100) Genomic(1) cDNA(98) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000028700
DoTS DT.101373611, DT.101373612, DT.491685
UniGene 196045
DFCI TC1575479, TC1595648
NIA Mouse Gene Index U004684
Entrez Gene 68273
VEGA Gene Model OTTMUSG00000009309
International Mouse Knockout Project Status Pomgnt1
Protein
domains
InterPro ID Description
IPR004139 Glycosyl transferase, family 13
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:144746 Kanagawa M et al., "Residual laminin-binding activity and enhanced dystroglycan glycosylation by LARGE in novel model mice to dystroglycanopathy." Hum Mol Genet 2009 Feb 15;18(4):621-31
All references(8)
Other
accession IDs
MGI:1924138

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory