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B3gnt2 Gene Detail
 Symbol
Name
ID
B3gnt2
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
MGI:1889505


Nomenclature History
Synonyms B3Galt6, B3gnt1
Genetic Map
Chromosome 11
12.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 2)

Sequence Map
Chr11:22679269-22760488 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human B3gnt2 ± 2 cM)
TreeFam: TF318639
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000005266 VEGA Gene Model | MGI Sequence Detail 81220 C57BL/6J ± Kb
transcript NM_016888 RefSeq | MGI Sequence Detail 2699 -
polypeptide Q9Z222 UniProt | EBI | MGI Sequence Detail 397 Not Applicable
For the selected sequences
All sequences(28)
Alleles
and
phenotypes
All alleles(114) : Targeted, other(1) Gene trapped(113)
Polymorphisms RFLP(1) SNPs within 2kb(257 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process axon guidance, protein amino acid glycosylation...
Component Golgi apparatus, integral to membrane...
Function galactosyltransferase activity, manganese ion binding...
External Resources: FuncBase
Expression Literature Summary: (5 records)
Data Summary: Assays (3)    Results (109)    Tissues (57)    Images (7)
Theiler Stages: 19,28
  Assay Type Assays   Results
      RT-PCR 1   35
      In situ reporter (knock in) 1   58
      Northern blot 1   16
cDNA source data(11)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(13) cDNA(12) Primer pair(1)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000051650
Consensus CDS Project CCDS24471.1
DFCI TC1575950
Entrez Gene 53625
VEGA Gene Model OTTMUSG00000005266
International Mouse Knockout Project Status B3gnt2
Protein
domains
InterPro ID Description
IPR002659 Glycosyl transferase, family 31
Graphical View of Protein Domain Structure
References
(Earliest) J:62502 Zhou D et al., "A beta-1,3-N-acetylglucosaminyltransferase with poly-N-acetyllactosamine synthase activity is structurally related to beta-1,3-galactosyltransferases." Proc Natl Acad Sci U S A 1999 Jan 19;96(2):406-11
(Latest) J:154369 Lanier J et al., "Brn3a regulates the transition from neurogenesis to terminal differentiation and represses non-neural gene expression in the trigeminal ganglion." Dev Dyn 2009 Oct 29;238(12):3065-3079
All references(12)
Other
accession IDs
MGI:1890585, MGI:2143981, MGI:2143995, MGI:2144521

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory