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Extl1 Gene Detail
 Symbol
Name
ID
Extl1
exostoses (multiple)-like 1
MGI:1888742

Nomenclature History
Synonyms D430033M16Rik
Genetic Map
Chromosome 4
60.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 4)

Sequence Map
Chr4:133912287-133939765 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Extl1 ± 2 cM)
TreeFam: TF314231
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000010832 VEGA Gene Model | MGI Sequence Detail 27479 C57BL/6J ± Kb
transcript NM_019578 RefSeq | MGI Sequence Detail 4129 C57BL/6
polypeptide Q9JKV7 UniProt | EBI | MGI Sequence Detail 669 Not Applicable
For the selected sequences
All sequences(28)
Alleles
and
phenotypes 		All alleles(2) : Gene trapped(2)
Polymorphisms SNPs within 2kb(152 from dbSNP Build 128)   SNPs within 2kb including multiple locations(156)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Component endoplasmic reticulum, integral to membrane...
Function glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity, transferase activity...
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (3)    Results (33)    Tissues (33)    Images (8)
Theiler Stages: 13,17,19,21,24,28
  Assay Type Assays   Results
      RNA in situ 2   25
      Northern blot 1   8
cDNA source data(23)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(25) Genomic(1) cDNA(23) Primer pair(1)
Microarray probesets(2)
Other database
links
EC 2.4.1.224
Ensembl Gene Model ENSMUSG00000028838
DoTS DT.110803351, DT.483888, DT.91352395
Consensus CDS Project CCDS18770.1
UniGene 30978
DFCI TC1583447, TC1584538, TC1616019
NIA Mouse Gene Index U025640
Entrez Gene 56219
VEGA Gene Model OTTMUSG00000010832
International Mouse Knockout Project Status Extl1
Protein
domains
InterPro ID Description
IPR004263 Exostosin-like
IPR015338 EXTL2, alpha-1,4-N-acetylhexosaminyltransferase
Graphical View of Protein Domain Structure
References
(Earliest) J:63309 Stickens D et al., "EXT genes are differentially expressed in bone and cartilage during mouse embryogenesis." Dev Dyn 2000 Jul;218(3):452-64
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(5)
Other
accession IDs 		MGI:2443243
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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