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Cacng3 Gene Detail
 Symbol
Name
ID
Cacng3
calcium channel, voltage-dependent, gamma subunit 3
MGI:1859165


Nomenclature History
Genetic Map
Chromosome 7
cytoband F3
 
Mapping data( 1)
Sequence Map
Chr7:129815288-129912360 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF327980
Sequences
Representative Sequences Length Strain/Species Flank
genomic 54376 NCBI Gene Model | MGI Sequence Detail 97073 C57BL/6J ± Kb
transcript NM_019430 RefSeq | MGI Sequence Detail 1540 C57BL/6
polypeptide Q9JJV5 UniProt | EBI | MGI Sequence Detail 315 Not Applicable
For the selected sequences
All sequences(15)
Alleles
and
phenotypes
All alleles(2) : Targeted, knock-out(1) Targeted, other(1)
Male mice homozygous for disruptions in this gene have elevated cholesterol and HDL levels.
Polymorphisms SNPs within 2kb(481 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process calcium ion transport, ion transport...
Component integral to membrane, membrane...
Function calcium channel activity, calcium ion binding...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (3)    Results (81)    Tissues (56)    Images (16)
Theiler Stages: 17,20,22,28
  Assay Type Assays   Results
      RT-PCR 2   45
      In situ reporter (knock in) 1   36
cDNA source data(4)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(6) cDNA(4) Primer pair(2)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000066189
DoTS DT.55157802, DT.91331113
Consensus CDS Project CCDS21816.1
UniGene 444212
DFCI TC1647164, TC1709444
NIA Mouse Gene Index U063686
Entrez Gene 54376
International Mouse Knockout Project Status Cacng3
Protein
domains
InterPro ID Description
IPR004031 PMP-22/EMP/MP20/Claudin
IPR008368 Voltage-dependent calcium channel, gamma subunit
Graphical View of Protein Domain Structure
References
(Earliest) J:61749 Burgess DL et al., "Identification of three novel Ca(2+) channel gamma subunit genes reveals molecular diversification by tandem and chromosome duplication." Genome Res 1999 Dec;9(12):1204-13
(Latest) J:138791 Menuz K et al., "TARP redundancy is critical for maintaining AMPA receptor function." J Neurosci 2008 Aug 27;28(35):8740-6
All references(5)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory