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St6galnac4 Gene Detail
 Symbol
Name
ID
St6galnac4
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
MGI:1341894


Nomenclature History
Synonyms Siat7d, ST6GalNAc IV
Genetic Map
Chromosome 2
Syntenic
 
Mapping data( 2)
Sequence Map
Chr2:32442615-32455218 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; dog, domestic    (Mammalian Orthology)
Protein SuperFamily: sialyltransferase
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000011982 VEGA Gene Model | MGI Sequence Detail 12604 C57BL/6J ± Kb
transcript NM_011373 RefSeq | MGI Sequence Detail 4406 C57BL/6
polypeptide Q9R2B6 UniProt | EBI | MGI Sequence Detail 360 Not Applicable
For the selected sequences
All sequences(38)
Alleles
and
phenotypes
All alleles(1) : Gene trapped(1)
Polymorphisms SNPs within 2kb(61 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process protein amino acid glycosylation
Component Golgi apparatus, integral to Golgi membrane...
Function (alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl-galactosaminide 6-alpha-sialyltransferase activity, sialyltransferase activity...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (3)    Results (32)    Tissues (14)    Images (2)
Theiler Stages: 12,20,28
  Assay Type Assays   Results
      RT-PCR 1   13
      Northern blot 2   19
cDNA source data(65)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(67) Genomic(1) cDNA(65) Primer pair(1)
Microarray probesets(3)
Other database
links
EC 2.4.99.7
Ensembl Gene Model ENSMUSG00000079442
DoTS DT.101386437, DT.40162549, DT.490689, DT.91342976
Consensus CDS Project CCDS15921.1
UniGene 27446
DFCI TC1576334, TC1606119
NIA Mouse Gene Index U001624
Entrez Gene 20448
VEGA Gene Model OTTMUSG00000011982
International Mouse Knockout Project Status St6galnac4
Protein
domains
InterPro ID Description
IPR001675 Glycosyl transferase, family 29
IPR012163 Sialyltransferase
Graphical View of Protein Domain Structure
References
(Earliest) J:54623 Lee YC et al., "Molecular cloning and functional expression of two members of mouse NeuAcalpha2, 3 Galbeta1,3GalNAc GalNAcalpha2,6-sialyltransferase family, ST6GalNAc III and IV." J Biol Chem 1999 Apr 23;274(17):11958-67
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(7)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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