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St6galnac1 Gene Detail
 Symbol
Name
ID
St6galnac1
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
MGI:1341826


Nomenclature History
Synonyms Siat7a, ST6GalNAc I
Genetic Map
Chromosome 11
cytoband E2
 
Mapping data( 2)
Sequence Map
Chr11:116626339-116636821 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000003789 VEGA Gene Model | MGI Sequence Detail 10483 C57BL/6J ± Kb
transcript NM_011371 RefSeq | MGI Sequence Detail 2396 C57BL/6
polypeptide Q9QZ39 UniProt | EBI | MGI Sequence Detail 526 Not Applicable
For the selected sequences
All sequences(19)
Polymorphisms SNPs within 2kb(11 from dbSNP Build 128)   SNPs within 2kb including multiple locations(31)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process ganglioside biosynthetic process, oligosaccharide biosynthetic process...
Component Golgi apparatus, integral to Golgi membrane...
Function alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity, sialyltransferase activity...
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (1)    Results (13)    Tissues (13)
Theiler Stages: 12,28
  Assay Type Assays   Results
      RT-PCR 1   13
cDNA source data(2)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(5) Genomic(1) cDNA(3) Primer pair(1)
Microarray probesets(2)
Other database
links
EC 2.4.99.3
Ensembl Gene Model ENSMUSG00000009588
Consensus CDS Project CCDS36380.1
DFCI TC1592196
NIA Mouse Gene Index U040486
Entrez Gene 20445
VEGA Gene Model OTTMUSG00000003789
International Mouse Knockout Project Status St6galnac1
Protein
domains
InterPro ID Description
IPR001675 Glycosyl transferase, family 29
Graphical View of Protein Domain Structure
References
(Earliest) J:54623 Lee YC et al., "Molecular cloning and functional expression of two members of mouse NeuAcalpha2, 3 Galbeta1,3GalNAc GalNAcalpha2,6-sialyltransferase family, ST6GalNAc III and IV." J Biol Chem 1999 Apr 23;274(17):11958-67
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(7)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory