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Sap18 Gene Detail
 Symbol
Name
ID
Sap18
Sin3-associated polypeptide 18
MGI:1277978

Nomenclature History
Synonyms C530046K05Rik, D11Ertd539e, EMegR4, EMegR4, SAP18, Sinbp1
Genetic Map
Chromosome 14
28.5 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 2)

Sequence Map
Chr14:58417017-58423817 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Sap18 ± 2 cM)
Protein SuperFamily: histone deacetylase complex, subunit SAP18
TreeFam: TF313032
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000022377 VEGA Gene Model | MGI Sequence Detail 6801 C57BL/6J ± Kb
transcript NM_009119 RefSeq | MGI Sequence Detail 3472 C57BL/6
polypeptide O55128 UniProt | EBI | MGI Sequence Detail 153 Not Applicable
For the selected sequences
All sequences(23)
Alleles
and
phenotypes 		All alleles(1) : Targeted, knock-out(1)
Polymorphisms SNPs within 2kb(11 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process chromatin modification, regulation of transcription...
Component cytoplasm, histone deacetylase complex...
Function molecular_function
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (2)    Results (33)    Tissues (33)    Images (3)
Theiler Stages: 17,21,28
  Assay Type Assays   Results
      RNA in situ 2   33
cDNA source data(21)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(22) cDNA(21) Primer pair(1)
Microarray probesets(6)
Other database
links
Ensembl Gene Model ENSMUSG00000021963
Consensus CDS Project CCDS27159.1
Entrez Gene 20220
VEGA Gene Model OTTMUSG00000022377
International Mouse Knockout Project Status Sap18
Protein
domains
InterPro ID Description
IPR010516 Sin3 associated polypeptide p18
IPR017250 Histone deacetylase complex, SAP18 subunit
Graphical View of Protein Domain Structure
References
(Earliest) J:46097 Boehmelt G et al., "Cloning of the murine transcriptional corepressor component SAP18 and differential expression of its mRNA in the hematopoietic hierarchy." Gene 1998 Jan 30;207(2):267-75
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(7)
Other
accession IDs 		MGI:1203397, MGI:1261774, MGI:2443909
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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