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Nsdhl Gene Detail
 Symbol
Name
ID
Nsdhl
NAD(P) dependent steroid dehydrogenase-like
MGI:1099438


Nomenclature History
Synonyms bare patches, Bpa, H105E3, Str, striated, XAP104
Genetic Map
Chromosome X
28.87 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 17)

Sequence Map
ChrX:70163896-70203853 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Nsdhl ± 2 cM)
Protein SuperFamily: bifunctional 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase
TreeFam: TF354279
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000017843 VEGA Gene Model | MGI Sequence Detail 39958 C57BL/6J ± Kb
transcript NM_010941 RefSeq | MGI Sequence Detail 2218 -
polypeptide Q9R1J0 UniProt | EBI | MGI Sequence Detail 362 Not Applicable
For the selected sequences
All sequences(31)
Alleles
and
phenotypes
All alleles(14) : Gene trapped(4) Spontaneous(3) Chemically induced(2) Radiation induced(5)
Heterozygous females exhibit a striped coat or skin hyperkeratotic lesions leaving bare patches on the coat, with some mutations also resulting in skeletal dysplasia and eye defects. Hemizygous male and homozygous female mice die before birth, presumably due to placental defects.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)  
Polymorphisms SNPs within 2kb(189 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(18)
Process cholesterol biosynthetic process, cholesterol metabolic process...
Component integral to membrane, membrane...
Function 3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding...
External Resources: MouseFunc
Expression Literature Summary: (4 records)
Data Summary: Assays (4)    Results (23)    Tissues (23)    Images (2)
Theiler Stages: 15,17,19,20,21,22,23,24,25,26,28
  Assay Type Assays   Results
      RT-PCR 2   3
      Northern blot 2   20
cDNA source data(13)
External Resources: Allen Brain Atlas  GENSAT  GEO 
Molecular
reagents
All nucleic(21) Genomic(6) cDNA(13) Primer pair(2)
Microarray probesets(2)
Pathways
cholesterol biosynthesis I
cholesterol biosynthesis III (via desmosterol)
superpathway of cholesterol biosynthesis
Other database
links
EC 1.1.1.170
Ensembl Gene Model ENSMUSG00000031349
DoTS DT.40158368, DT.40168429, DT.485623, DT.492820
DFCI TC1575239
Entrez Gene 18194
VEGA Gene Model OTTMUSG00000017843
International Mouse Knockout Project Status Nsdhl
Protein
domains
InterPro ID Description
IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase
IPR016040 NAD(P)-binding domain
Graphical View of Protein Domain Structure
References
(Earliest) J:272 Lyon MF, "Attempts to test the inactive-X theory of dosage compensation in mammals" Genet Res 1963;4():93-103
(Latest) J:114852 Jiang F et al., "Analysis of Nsdhl-deficient embryos reveals a role for Hedgehog signaling in early placental development." Hum Mol Genet 2006 Nov 15;15(22):3293-305
All references(32)
Other
accession IDs
MGD-MRK-14635, MGD-MRK-1611, MGI:2147912, MGI:88187, MGI:98437

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory