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Galnt3 Gene Detail
 Symbol
Name
ID
Galnt3
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3
MGI:894695


Nomenclature History
Synonyms ppGaNTase-T3
Genetic Map
Chromosome 2
cytoband C3
 
Mapping data( 3)
Sequence Map
Chr2:65920823-65963051 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Protein SuperFamily: polypeptide N-acetylgalactosaminyltransferase
TreeFam: TF313267
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000013003 VEGA Gene Model | MGI Sequence Detail 42229 C57BL/6J ± Kb
transcript NM_015736 RefSeq | MGI Sequence Detail 3684 C57BL/6
polypeptide P70419 UniProt | EBI | MGI Sequence Detail 633 Not Applicable
For the selected sequences
All sequences(27)
Alleles
and
phenotypes
All alleles(1) : Targeted, knock-out(1)
Mice homozygous for a knock-out allele exhibit decreased circulating alkaline phosphatase, hypercalcemia, hyperphosphatemia, decreased circulating parathyroid hormone, and male specific postnatal growth retardation, infertility, and increase in bone density.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)  
Polymorphisms SNPs within 2kb(212 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Component Golgi apparatus, integral to membrane...
Function calcium ion binding, manganese ion binding...
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (1)    Results (9)    Tissues (9)
Theiler Stages: 11,20,22,24
  Assay Type Assays   Results
      RNA in situ 1   9
cDNA source data(68)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(71) Genomic(2) cDNA(68) Primer pair(1)
Microarray probesets(4)
Other database
links
EC 2.4.1.41
Ensembl Gene Model ENSMUSG00000026994
DoTS DT.524355, DT.91330028, DT.94251897
Consensus CDS Project CCDS16075.1
UniGene 439760
DFCI TC1579663, TC1613957, TC1685051, TC1739721
NIA Mouse Gene Index U022693
Entrez Gene 14425
VEGA Gene Model OTTMUSG00000013003
International Mouse Knockout Project Status Galnt3
Protein
domains
InterPro ID Description
IPR000772 Ricin B lectin
IPR001173 Glycosyl transferase, family 2
IPR008997 Ricin B-related lectin
Graphical View of Protein Domain Structure
References
(Earliest) J:36626 Zara J et al., "Cloning and expression of mouse UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-T3." Biochem Biophys Res Commun 1996 Nov 1;228(1):38-44
(Latest) J:151805 Ichikawa S et al., "Ablation of the Galnt3 gene leads to low-circulating intact fibroblast growth factor 23 (Fgf23) concentrations and hyperphosphatemia despite increased Fgf23 expression." Endocrinology 2009 Jun;150(6):2543-50
All references(9)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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