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Cacnb4 Gene Detail
 Symbol
Name
ID
Cacnb4
calcium channel, voltage-dependent, beta 4 subunit
MGI:103301


Nomenclature History
Synonyms 3110038O15Rik, Cchb4
Genetic Map
Chromosome 2
31.5 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 11)

Sequence Map
Chr2:52283845-52532350 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Cacnb4 ± 2 cM)
Protein SuperFamily: human voltage-dependent calcium channel beta chain
TreeFam: TF316195
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000012607 VEGA Gene Model | MGI Sequence Detail 248506 C57BL/6J ± Kb
transcript NM_001037099 RefSeq | MGI Sequence Detail 7981 C57BL/6
polypeptide Q8R0S4 UniProt | EBI | MGI Sequence Detail 519 Not Applicable
For the selected sequences
All sequences(32)
Alleles
and
phenotypes
All alleles(4) : Spontaneous(4)
Homozygous mutants have lethargic behavior, unstable gait and seizures, with peripheral motor nerves showing reduced conduction velocity and prolonged distal latency.
Polymorphisms RFLP(2) SNPs within 2kb(1087 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications(29)
Process adult walking behavior, calcium ion transport...
Component voltage-gated calcium channel complex
Function calcium channel activity, calcium ion binding...
This is a GO Consortium Reference Genome Project gene.
External Resources: MouseFunc
Expression Literature Summary: (4 records)
Data Summary: Assays (2)    Results (22)    Tissues (16)    Images (9)
Theiler Stages: 15,17,20,23,25,26,28
  Assay Type Assays   Results
      RT-PCR 1   3
      Immunohistochemistry 1   19
cDNA source data(14)
External Resources: Allen Brain Atlas  GEO 
Molecular
reagents
All nucleic(20) cDNA(18) Primer pair(1) Other(1) Antibodies(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000017412
UniGene 330223
PDB 1VYV
Entrez Gene 12298
VEGA Gene Model OTTMUSG00000012607
International Mouse Knockout Project Status Cacnb4
Protein
domains
InterPro ID Description
IPR000584 Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 Src homology-3 domain
IPR008145 Guanylate kinase/L-type calcium channel
Graphical View of Protein Domain Structure
References
(Earliest) J:28465 Dickie MM, "Lethargic (lh)" Mouse News Lett 1964;30():31
(Latest) J:142800 Brunskill EW et al., "Atlas of gene expression in the developing kidney at microanatomic resolution. (Erratum: Dev Cell 2009; 16:482)" Dev Cell 2008 Nov;15(5):781-91
All references(58)
Other
accession IDs
MGD-MRK-11801, MGD-MRK-24185, MGI:1920370

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/20/2009
MGI_4.31
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The Jackson Laboratory