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Cyp11a1 Gene Detail
 Symbol
Name
ID
Cyp11a1
cytochrome P450, family 11, subfamily a, polypeptide 1
MGI:88582


Nomenclature History
Synonyms cholesterol side chain cleavage, cscc, Cyp11a, D9Ertd411e, P450scc, Scc
Genetic Map
Chromosome 9
31.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 9)

Sequence Map
Chr9:57862823-57874828 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; goat; pig, domestic; rat; sheep    (Mammalian Orthology)
Comparative Map (Mouse/Human Cyp11a1 ± 2 cM)
Protein SuperFamily: cytochrome P450 CYP11B1
TreeFam: TF105094
Sequences
Representative Sequences Length Strain/Species Flank
genomic 13070 NCBI Gene Model | MGI Sequence Detail 12006 C57BL/6J ± Kb
transcript NM_019779 RefSeq | MGI Sequence Detail 1774 C57BL/6
polypeptide Q9QZ82 UniProt | EBI | MGI Sequence Detail 526 Not Applicable
For the selected sequences
All sequences(26)
Alleles
and
phenotypes
All alleles(2) : Targeted, knock-out(1) Targeted, other(1)
Homozygous null mice are exhibit a steroid deficiency and die within days of birth showing signs of dehydration. Males are feminized with female external genitalia and underdeveloped gonads.
Polymorphisms RFLP(1) SNPs within 2kb(53 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (18 annotations)
Process C21-steroid hormone biosynthetic process, cholesterol metabolic process...
Component membrane, mitochondrion...
Function cholesterol monooxygenase (side-chain-cleaving) activity, electron carrier activity...
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression Literature Summary: (54 records)
Data Summary: Assays (9)    Results (84)    Tissues (38)    Images (4)
Theiler Stages: 4,10,18,20,21,22,23,24,25,26,28
  Assay Type Assays   Results
      RT-PCR 6   72
      RNA in situ 3   12
cDNA source data(71)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(82) Genomic(1) cDNA(74) Primer pair(6) Other(1)
Microarray probesets(2)
Pathways
biosynthesis of estrogens
biosynthesis of corticosteroids
biosynthesis of androgens
Other database
links
EC 1.14.15.6
Ensembl Gene Model ENSMUSG00000032323
DoTS DT.101724049, DT.40151364, DT.533628
Consensus CDS Project CCDS40653.1
UniGene 302865
DFCI TC1578831, TC1604914
NIA Mouse Gene Index U010560, U010561
Entrez Gene 13070
International Mouse Knockout Project Status Cyp11a1
Protein
domains
InterPro ID Description
IPR001128 Cytochrome P450
IPR002401 Cytochrome P450, E-class, group I
IPR017972 Cytochrome P450, conserved site
IPR017973 Cytochrome P450, C-terminal
Graphical View of Protein Domain Structure
References
(Earliest) J:26017 Perkins LM et al., "Quantification of P450scc, P450(17) alpha, and iron sulfur protein reductase in Leydig cells and adrenals of inbred strains of mice." Endocrinology 1988 Dec;123(6):2675-82
(Latest) J:153428 Liljander M et al., "Increased litter size and super-ovulation rate in congenic C57BL mice carrying a polymorphic fragment of NFR/N origin at the Fecq4 locus of chromosome 9." Genet Res 2009 Aug;91(4):259-65
All references(76)
Other
accession IDs
MGD-MRK-2291, MGI:1196317

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory