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Rab3d Gene Detail
 Symbol
Name
ID
Rab3d
RAB3D, member RAS oncogene family
MGI:97844


Nomenclature History
Synonyms C130057E11Rik
Genetic Map
Chromosome 9
cytoband A2-A3
 
Mapping data( 4)
Sequence Map
Chr9:21711935-21722636 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; dog, domestic; rat    (Mammalian Orthology)
Protein SuperFamily: Ras-related protein Rab
TreeFam: TF313199
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000031911 VEGA Gene Model | MGI Sequence Detail 10702 C57BL/6J ± Kb
transcript NM_031874 RefSeq | MGI Sequence Detail 3868 C57BL/6
polypeptide P35276 UniProt | EBI | MGI Sequence Detail 219 Not Applicable
For the selected sequences
All sequences(36)
Alleles
and
phenotypes
All alleles(2) : Targeted, knock-out(1) Gene trapped(1)
Mice homozygous for disruptions in this gene show no obvious phenotypic changes. Secretory granules in mast cells and some exocrine glands are double in volume however.
Polymorphisms SNPs within 2kb(10 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (16 annotations)
Process exocytosis, peptidyl-cysteine methylation...
Component membrane, mitochondrion...
Function GTP binding, nucleotide binding...
External Resources: FuncBase
Expression Literature Summary: (3 records)
Data Summary: Assays (1)    Results (1)    Tissues (1)    Images (1)
Theiler Stages: 22
  Assay Type Assays   Results
      RNA in situ 1   1
cDNA source data(147)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(149) Genomic(1) cDNA(148)
Microarray probesets(5)
Other database
links
Ensembl Gene Model ENSMUSG00000019066
DoTS DT.101248610, DT.91352006, DT.94360357, DT.94360360
Consensus CDS Project CCDS22912.1
UniGene 260157
DFCI TC1572904, TC1723310, TC1764997
NIA Mouse Gene Index U030593, U312105
Entrez Gene 19340
VEGA Gene Model OTTMUSG00000031911
International Mouse Knockout Project Status Rab3d
Protein
domains
InterPro ID Description
IPR001806 Ras GTPase
IPR003579 Ras small GTPase, Rab type
IPR005225 Small GTP-binding protein
IPR013753 Ras
IPR015596 Rab3
IPR020851 Small GTPase
Graphical View of Protein Domain Structure
References
(Earliest) J:1134 Baldini G et al., "Cloning of a Rab3 isotype predominantly expressed in adipocytes." Proc Natl Acad Sci U S A 1992 Jun 1;89(11):5049-52
(Latest) J:151002 Pagliarini DJ et al., "A mitochondrial protein compendium elucidates complex I disease biology." Cell 2008 Jul 11;134(1):112-23
All references(20)
Other
accession IDs
MGD-MRK-13747, MGI:2442160

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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