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Ampd1 Gene Detail
 Symbol
Name
ID
Ampd1
adenosine monophosphate deaminase 1 (isoform M)
MGI:88015

Nomenclature History
Synonyms Ampd-1
Genetic Map
Chromosome 3
48.5 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 9)

Sequence Map
Chr3:102877937-102903637 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Ampd1 ± 2 cM)
Protein SuperFamily: AMP deaminase
TreeFam: TF300439
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000030299 VEGA Gene Model | MGI Sequence Detail 25701 C57BL/6J ± Kb
transcript NM_001033303 RefSeq | MGI Sequence Detail 2342 -
polypeptide Q3V1D3 UniProt | EBI | MGI Sequence Detail 745 Not Applicable
For the selected sequences
All sequences(15)
Alleles
and
phenotypes 		All alleles(25) : Targeted, other(1) Gene trapped(24)
Polymorphisms RFLP(1) SNPs within 2kb(102 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process nucleotide metabolic process, purine base metabolic process...
Function AMP deaminase activity, deaminase activity...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (3)    Results (11)    Tissues (6)    Images (4)
Theiler Stages: 19,21,23,25,28
  Assay Type Assays   Results
      RT-PCR 2   8
      RNA in situ 1   3
cDNA source data(13)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(17) cDNA(15) Primer pair(2)
Microarray probesets(1)
Pathways
purine degradation I (aerobic)
Other database
links
EC 3.5.4.6
Ensembl Gene Model ENSMUSG00000070385
DoTS DT.40184118, DT.487835
Consensus CDS Project CCDS38571.1
UniGene 331272
DFCI TC1582766
NIA Mouse Gene Index U227636
Entrez Gene 229665
VEGA Gene Model OTTMUSG00000030299
International Mouse Knockout Project Status Ampd1
Protein
domains
InterPro ID Description
IPR001365 Adenosine/AMP deaminase
IPR006329 AMP deaminase
IPR006650 Adenosine/AMP deaminase active site
IPR016297 AMP deaminase, metazoa
Graphical View of Protein Domain Structure
References
(Earliest) J:10446 Moseley WS et al., "Ampd-2 maps to distal mouse chromosome 3 in linkage with Ampd-1." Genomics 1990 Mar;6(3):572-4
(Latest) J:127524 Davie JK et al., "Target gene selectivity of the myogenic basic helix-loop-helix transcription factor myogenin in embryonic muscle." Dev Biol 2007 Nov 15;311(2):650-64
All references(12)
Other
accession IDs 		MGD-MRK-1307, MGD-MRK-1309, MGI:2139757
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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