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Tlr13 Gene Detail
 Symbol
Name
ID
Tlr13
toll-like receptor 13
MGI:3045213


Nomenclature History
Synonyms LOC279572
Genetic Map
Chromosome X
Syntenic
 
Mapping data( 2)
Sequence Map
ChrX:103338543-103355832 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
TreeFam: TF325595
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000018275 VEGA Gene Model | MGI Sequence Detail 17290 C57BL/6J ± Kb
transcript NM_205820 RefSeq | MGI Sequence Detail 4014 C57BL/6
polypeptide Q6R5N8 UniProt | EBI | MGI Sequence Detail 991 Not Applicable
For the selected sequences
All sequences(18)
Alleles
and
phenotypes
All alleles(1) : Targeted, knock-out(1)
Polymorphisms SNPs within 2kb(50 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process immune response, inflammatory response...
Component integral to membrane, intrinsic to membrane...
Function protein binding, receptor activity...
External Resources: FuncBase
Expression cDNA source data(8)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(9) Genomic(1) cDNA(8)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000033777
DoTS DT.101297412
Consensus CDS Project CCDS30338.1
UniGene 336203
DFCI TC1583916
NIA Mouse Gene Index U147154
Entrez Gene 279572
VEGA Gene Model OTTMUSG00000018275
International Mouse Knockout Project Status Tlr13
Protein
domains
InterPro ID Description
IPR000157 Toll-Interleukin receptor
IPR001611 Leucine-rich repeat
IPR003591 Leucine-rich repeat, typical subtype
Graphical View of Protein Domain Structure
References
(Earliest) J:88906 Tabeta K et al., "Toll-like receptors 9 and 3 as essential components of innate immune defense against mouse cytomegalovirus infection." Proc Natl Acad Sci U S A 2004 Mar 9;101(10):3516-21
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(3)
Other
accession IDs
MGI:2147911, MGI:2685559

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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The Jackson Laboratory