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Ell3 Gene Detail
 Symbol
Name
ID
Ell3
elongation factor RNA polymerase II-like 3
MGI:2673679

Nomenclature History
Genetic Map
Chromosome 2
Syntenic
 
Mapping data( 2)
Sequence Map
Chr2:121264746-121270014 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF337345
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000015326 VEGA Gene Model | MGI Sequence Detail 5269 C57BL/6J ± Kb
transcript NM_145973 RefSeq | MGI Sequence Detail 1745 -
polypeptide Q80VR2 UniProt | EBI | MGI Sequence Detail 395 Not Applicable
For the selected sequences
All sequences(15)
Polymorphisms SNPs within 2kb(32 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process regulation of transcription, RNA elongation from RNA polymerase II promoter...
Component nucleus, transcription elongation factor complex...
Function RNA polymerase II transcription elongation factor activity
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (1)    Results (2)    Tissues (2)    Images (1)
Theiler Stages: 12,15
  Assay Type Assays   Results
      RNA in situ 1   2
cDNA source data(17)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(19) Genomic(1) cDNA(18)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000027246
DoTS DT.524204, DT.533213
Consensus CDS Project CCDS16644.1
UniGene 330522
DFCI TC1584708
NIA Mouse Gene Index U023264
Entrez Gene 269344
VEGA Gene Model OTTMUSG00000015326
International Mouse Knockout Project Status Ell3
Protein
domains
InterPro ID Description
IPR010844 Occludin/RNA polymerase II elongation factor, ELL domain
IPR019464 RNA polymerase II elongation factor ELL
Graphical View of Protein Domain Structure
References
(Earliest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
(Latest) J:122516 Sherwood RI et al., "Prospective isolation and global gene expression analysis of definitive and visceral endoderm." Dev Biol 2007 Apr 15;304(2):541-55
All references(3)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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