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Clec2h Gene Detail
 Symbol
Name
ID
Clec2h
C-type lectin domain family 2, member h
MGI:2136934

Nomenclature History
Synonyms Clrf
Genetic Map
Chromosome 6
cytoband F3
 
Mapping data( 1)
Sequence Map
Chr6:128612404-128627389 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF351467
Sequences
Representative Sequences Length Strain/Species Flank
genomic 94071 NCBI Gene Model | MGI Sequence Detail 14986 C57BL/6J ± Kb
transcript NM_053165 RefSeq | MGI Sequence Detail 2156 C57BL/6
polypeptide Q8C1T8 UniProt | EBI | MGI Sequence Detail 218 Not Applicable
For the selected sequences
All sequences(14)
Polymorphisms SNPs within 2kb(80 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process cellular defense response
Component integral to membrane, integral to plasma membrane...
Function binding, receptor activity...
External Resources: FuncBase
Expression cDNA source data(14)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(15) cDNA(15)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000030364
DoTS DT.40146363, DT.97411735
Consensus CDS Project CCDS20576.1
UniGene 197689
DFCI TC1582395
Entrez Gene 94071
International Mouse Knockout Project Status Clec2h
Protein
domains
InterPro ID Description
IPR001304 C-type lectin
IPR002353 Type II antifreeze protein
IPR016186 C-type lectin-like
IPR016187 C-type lectin fold
Graphical View of Protein Domain Structure
References
(Earliest) J:69859 Plougastel B et al., "Cloning of Clr, a new family of lectin-like genes localized between mouse Nkrp1a and Cd69." Immunogenetics 2001 Apr;53(3):209-14
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(2)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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