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Ublcp1 Gene Detail
 Symbol
Name
ID
Ublcp1
ubiquitin-like domain containing CTD phosphatase 1
MGI:1933105

Nomenclature History
Synonyms 4930527B16Rik, 8430435I17Rik, MGC:7513
Genetic Map
Chromosome 11
cytoband A3.1
 
Mapping data( 3)
Sequence Map
Chr11:44268073-44284000 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF323786
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000005470 VEGA Gene Model | MGI Sequence Detail 15928 C57BL/6J ± Kb
transcript NM_024475 RefSeq | MGI Sequence Detail 2155 C57BL/6
polypeptide Q8BGR9 UniProt | EBI | MGI Sequence Detail 318 Not Applicable
For the selected sequences
All sequences(35)
Alleles
and
phenotypes 		All alleles(4) : Gene trapped(4)
Polymorphisms SNPs within 2kb(106 from dbSNP Build 128)   SNPs within 2kb including multiple locations(112)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Component nucleus
Function hydrolase activity, phosphoprotein phosphatase activity...
External Resources: FuncBase
Expression cDNA source data(12)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(15) Genomic(1) cDNA(14)
Microarray probesets(2)
Other database
links
EC 3.1.3.16
Ensembl Gene Model ENSMUSG00000041231
DoTS DT.101236499, DT.101388052, DT.482382, DT.531095, DT.94162117
Consensus CDS Project CCDS24564.1
PDB 1V5T
DFCI TC1572051, TC1596709, TC1600297, TC1718042
NIA Mouse Gene Index U032530, U032685, U064354
Entrez Gene 79560
VEGA Gene Model OTTMUSG00000005470
International Mouse Knockout Project Status Ublcp1
Protein
domains
InterPro ID Description
IPR000626 Ubiquitin
IPR004274 NLI interacting factor
IPR011943 HAD-superfamily hydrolase, subfamily IIID
IPR019955 Ubiquitin supergroup
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(5)
Other
accession IDs 		MGI:1918768, MGI:1923084
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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