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Crispld2 Gene Detail
 Symbol
Name
ID
Crispld2
cysteine-rich secretory protein LCCL domain containing 2
MGI:1926142

Nomenclature History
Synonyms 1810049K24Rik, coffeecrisp, Lgl1
Genetic Map
Chromosome 8
cytoband E1
 
Mapping data( 2)
Sequence Map
Chr8:122516338-122576693 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic    (Mammalian Orthology)
TreeFam: TF316148
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000025222 VEGA Gene Model | MGI Sequence Detail 60356 C57BL/6J ± Kb
transcript NM_030209 RefSeq | MGI Sequence Detail 4165 C57BL/6
polypeptide Q8BZQ2 UniProt | EBI | MGI Sequence Detail 495 Not Applicable
For the selected sequences
All sequences(28)
Alleles
and
phenotypes 		All alleles(2) : Targeted, other(2)
Polymorphisms SNPs within 2kb(176 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process extracellular matrix organization
Component extracellular matrix, extracellular region...
Function glycosaminoglycan binding, heparin binding...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (5)    Results (22)    Tissues (21)    Images (1)
Theiler Stages: 20,21,23,26,28
  Assay Type Assays   Results
      Western blot 1   1
      RT-PCR 1   4
      RNA in situ 1   3
      Immunohistochemistry 2   14
cDNA source data(93)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(95) cDNA(94) Primer pair(1) Antibodies(2)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000031825
DoTS DT.50316941, DT.60100127, DT.91295241
Consensus CDS Project CCDS22714.1
UniGene 264680
DFCI TC1574954, TC1614691, TC1643221
NIA Mouse Gene Index U009883
Entrez Gene 78892
VEGA Gene Model OTTMUSG00000025222
International Mouse Knockout Project Status Crispld2
Protein
domains
InterPro ID Description
IPR001283 Allergen V5/Tpx-1 related
IPR004043 LCCL
IPR014044 SCP-like extracellular
IPR018244 Allergen V5/Tpx-1 related, conserved site
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:139122 Manabe R et al., "Transcriptome-based systematic identification of extracellular matrix proteins." Proc Natl Acad Sci U S A 2008 Sep 2;105(35):12849-54
All references(6)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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