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Rbm16 Gene Detail
 Symbol
Name
ID
Rbm16
RNA binding motif protein 16
MGI:1925212


Nomenclature History
Synonyms A630086M08Rik, A930036P18Rik, mKIAA1116
Genetic Map
Chromosome 17
Syntenic
 
Mapping data( 2)
Sequence Map
Chr17:3114967-3198855 bp, + strand
(From Ensembl annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human    (Mammalian Orthology)
TreeFam: TF324527
Sequences
Representative Sequences Length Strain/Species Flank
genomic ENSMUSG00000046201 Ensembl Gene Model | MGI Sequence Detail 83889 C57BL/6J ± Kb
transcript NM_134123 RefSeq | MGI Sequence Detail 4892 C57BL/6
polypeptide NP_598884 RefSeq | MGI Sequence Detail 1268 C57BL/6
For the selected sequences
All sequences(57)
Alleles
and
phenotypes
All alleles(69) : Gene trapped(69)
Polymorphisms SNPs within 2kb(350 from dbSNP Build 128)  
Expression Literature Summary: (1 records)
Data Summary: Assays (2)    Results (22)    Tissues (22)    Images (3)
Theiler Stages: 21,28
  Assay Type Assays   Results
      RT-PCR 1   2
      RNA in situ 1   20
cDNA source data(19)
External Resources: GEO  ArrayExpress 
Molecular
reagents
All nucleic(22) cDNA(21) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000046201
DoTS DT.101197748, DT.101386151, DT.522977, DT.523923, DT.55162250, DT.94127278
DFCI TC1575678, TC1619389, TC1627317, TC1627340, TC1635432
NIA Mouse Gene Index U037383, U378828
Entrez Gene 106583
International Mouse Knockout Project Status Rbm16
Protein
domains
InterPro ID Description
IPR000504 RNA recognition motif, RNP-1
IPR006569 RNA polymerase II, large subunit, CTD
IPR006903 Protein of unknown function DUF618
IPR008942 ENTH/VHS
IPR012677 Nucleotide-binding, alpha-beta plait
References
(Earliest) J:60984 Ko MS et al., "Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development." Development 2000 Apr;127(8):1737-49
(Latest) J:126097 Cobellis G et al., "Tagging genes with cassette-exchange sites." Nucleic Acids Res 2005;33(4):e44
All references(10)
Other
accession IDs
MGI:2146750, MGI:2146856, MGI:2146860, MGI:2146966, MGI:2443128

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/06/2010
MGI_4.32
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