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Spsb1 Gene Detail
 Symbol
Name
ID
Spsb1
splA/ryanodine receptor domain and SOCS box containing 1
MGI:1921896

Nomenclature History
Synonyms 1110014L01Rik, 4930422J18Rik, SSB1
Genetic Map
Chromosome 4
Syntenic
 
Mapping data( 2)
Sequence Map
Chr4:149270392-149329152 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF312822
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000010263 VEGA Gene Model | MGI Sequence Detail 58761 C57BL/6J ± Kb
transcript NM_029035 RefSeq | MGI Sequence Detail 3089 C57BL/6
polypeptide Q9D5L7 UniProt | EBI | MGI Sequence Detail 273 Not Applicable
For the selected sequences
All sequences(32)
Alleles
and
phenotypes 		All alleles(23) : Gene trapped(23)
Polymorphisms SNPs within 2kb(311 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process intracellular signaling cascade, modification-dependent protein catabolic process...
Component cytoplasm
External Resources: FuncBase
Expression Literature Summary: (1 records)
cDNA source data(12)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(12) cDNA(12)
Microarray probesets(5)
Other database
links
Ensembl Gene Model ENSMUSG00000039911
DoTS DT.101123697, DT.101262434, DT.40152050, DT.91345479
Consensus CDS Project CCDS18966.1
DFCI TC1574651, TC1591453, TC1594376, TC1595897
NIA Mouse Gene Index U025813
Entrez Gene 74646
VEGA Gene Model OTTMUSG00000010263
International Mouse Knockout Project Status Spsb1
Protein
domains
InterPro ID Description
IPR001496 SOCS protein, C-terminal
IPR001870 B302 (SPRY)-like
IPR003877 SPla/RYanodine receptor SPRY
IPR018355 SPla/RYanodine receptor subgroup
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:147204 Kleiber ML et al., "Divergence of the vertebrate sp1A/ryanodine receptor domain and SOCS box-containing (Spsb) gene family and its expression and regulation within the mouse brain." Genomics 2009 Apr;93(4):358-66
All references(8)
Other
accession IDs 		MGI:1922029, MGI:2140339, MGI:2140398
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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