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Rhobtb3 Gene Detail
 Symbol
Name
ID
Rhobtb3
Rho-related BTB domain containing 3
MGI:1920546

Nomenclature History
Synonyms 1700040C17Rik, 2610033K01Rik, 4930503C18Rik, mKIAA0878
Genetic Map
Chromosome 13
cytoband C1
 
Mapping data( 3)
Sequence Map
Chr13:76006985-76081373 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; rat    (Mammalian Orthology)
TreeFam: TF323347
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000023271 VEGA Gene Model | MGI Sequence Detail 74389 C57BL/6J ± Kb
transcript NM_028493 RefSeq | MGI Sequence Detail 4937 C57BL/6
polypeptide Q9CTN4 UniProt | EBI | MGI Sequence Detail 611 Not Applicable
For the selected sequences
All sequences(36)
Alleles
and
phenotypes 		All alleles(3) : Targeted, other(2) Gene trapped(1)
Polymorphisms SNPs within 2kb(385 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process transport
Component Golgi apparatus
Function ATP binding, hydrolase activity...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (3)    Results (36)    Tissues (34)
Theiler Stages: 2,3,4,5,7,11,15,19,21,23,25,28
  Assay Type Assays   Results
      RT-PCR 1   15
      Northern blot 2   21
cDNA source data(61)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(63) cDNA(62) Primer pair(1)
Microarray probesets(1)
Other database
links
Ensembl Gene Model ENSMUSG00000021589
DoTS DT.101380822, DT.101738094, DT.526235, DT.55171074, DT.91384040, DT.91403243
Consensus CDS Project CCDS26652.1
UniGene 276200
DFCI TC1587883, TC1597984, TC1600397
NIA Mouse Gene Index U034979
Entrez Gene 73296
VEGA Gene Model OTTMUSG00000023271
International Mouse Knockout Project Status Rhobtb3
Protein
domains
InterPro ID Description
IPR000210 BTB/POZ-like
IPR011333 BTB/POZ fold
IPR013069 BTB/POZ
IPR013753 Ras
Graphical View of Protein Domain Structure
References
(Earliest) J:735 Noonan DM et al., "The complete sequence of perlecan, a basement membrane heparan sulfate proteoglycan, reveals extensive similarity with laminin A chain, low density lipoprotein-receptor, and the neural cell adhesion molecule." J Biol Chem 1991 Dec 5;266(34):22939-47
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(8)
Other
accession IDs 		MGI:1916481, MGI:1922044, MGI:2145203, MGI:2145421
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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