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Sgip1 Gene Detail
 Symbol
Name
ID
Sgip1
SH3-domain GRB2-like (endophilin) interacting protein 1
MGI:1920344

Nomenclature History
Synonyms 3110007P09Rik
Genetic Map
Chromosome 4
Syntenic
 
Mapping data( 1)
Sequence Map
Chr4:102413902-102646233 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF328986
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000008057 VEGA Gene Model | MGI Sequence Detail 232332 C57BL/6J ± Kb
transcript NM_144906 RefSeq | MGI Sequence Detail 3738 -
polypeptide Q8VD37 UniProt | EBI | MGI Sequence Detail 806 Not Applicable
For the selected sequences
All sequences(51)
Polymorphisms SNPs within 2kb(1306 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process intracellular protein transport, vesicle-mediated transport...
Component clathrin adaptor complex
Function protein binding
External Resources: FuncBase
Expression cDNA source data(15)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(15) cDNA(15)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000028524
DoTS DT.101238663, DT.101382002, DT.101718024, DT.103561634, DT.110793817, DT.40149893, DT.60100989, DT.60117697, DT.87025560, DT.91575310, DT.94200182, DT.97411703
Consensus CDS Project CCDS18404.1
DFCI TC1580370, TC1590457, TC1590631, TC1596490, TC1605158, TC1610005, TC1611346, TC1705083, TC1761357
Entrez Gene 73094
VEGA Gene Model OTTMUSG00000008057
International Mouse Knockout Project Status Sgip1
Protein
domains
InterPro ID Description
IPR001037 Integrase, C-terminal, retroviral
IPR001584 Integrase, catalytic core
IPR003308 Integrase, N-terminal zinc-binding domain
IPR008968 Clathrin adaptor, mu subunit, C-terminal
IPR012337 Polynucleotidyl transferase, ribonuclease H fold
IPR018808 SAFF domain
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(4)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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