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Cpsf3l Gene Detail
 Symbol
Name
ID
Cpsf3l
cleavage and polyadenylation specific factor 3-like
MGI:1919207

Nomenclature History
Synonyms 2410006F12Rik
Genetic Map
Chromosome 4
83.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 3)

Sequence Map
Chr4:155243655-155263212 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Cpsf3l ± 2 cM)
TreeFam: TF105878
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000010891 VEGA Gene Model | MGI Sequence Detail 19558 C57BL/6J ± Kb
transcript NM_028020 RefSeq | MGI Sequence Detail 2347 C57BL/6
polypeptide Q9CWS4 UniProt | EBI | MGI Sequence Detail 600 Not Applicable
For the selected sequences
All sequences(25)
Alleles
and
phenotypes 		All alleles(3) : Gene trapped(3)
Polymorphisms SNPs within 2kb(185 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Component cytoplasm, nucleus...
Function hydrolase activity
External Resources: FuncBase
Expression cDNA source data(10)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(12) Genomic(1) cDNA(11)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000029034
Consensus CDS Project CCDS19048.1
DFCI TC1572981
NIA Mouse Gene Index U005223
Entrez Gene 71957
VEGA Gene Model OTTMUSG00000010891
International Mouse Knockout Project Status Cpsf3l
Protein
domains
InterPro ID Description
IPR001279 Beta-lactamase-like
IPR011108 RNA-metabolising metallo-beta-lactamase
Graphical View of Protein Domain Structure
References
(Earliest) J:60984 Ko MS et al., "Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development." Development 2000 Apr;127(8):1737-49
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(6)
Other
accession IDs 		MGI:2140491
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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