About   Help   FAQ
Tspan33 Gene Detail
 Symbol
Name
ID
Tspan33
tetraspanin 33
MGI:1919012


Nomenclature History
Synonyms 1300010A20Rik, Pen, Penumbra
Genetic Map
Chromosome 6
Syntenic
 
Mapping data( 1)
Sequence Map
Chr6:29644222-29668559 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
TreeFam: TF313002
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000013447 VEGA Gene Model | MGI Sequence Detail 24338 C57BL/6J ± Kb
transcript NM_146173 RefSeq | MGI Sequence Detail 1959 C57BL/6
polypeptide Q8R3S2 UniProt | EBI | MGI Sequence Detail 283 Not Applicable
For the selected sequences
All sequences(17)
Alleles
and
phenotypes
All alleles(1) : Targeted, knock-out(1)
Mice homozygous for a null mutation display anemia and partial penetrance of red blood cell abnormalities, splenomegaly, monocytosis, thrombocytopenia, reticulocytosis, and extramedullary hematopoiesis.
Polymorphisms SNPs within 2kb(55 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Component integral to membrane, membrane...
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (1)    Results (2)    Tissues (2)
Theiler Stages: 11,13
  Assay Type Assays   Results
      RNA in situ 1   2
cDNA source data(29)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents
All nucleic(29) cDNA(29)
Microarray probesets(5)
Other database
links
Ensembl Gene Model ENSMUSG00000001763
DoTS DT.531285, DT.94143336
Consensus CDS Project CCDS19964.1
UniGene 225289
DFCI TC1581253
NIA Mouse Gene Index U006618
Entrez Gene 232670
VEGA Gene Model OTTMUSG00000013447
International Mouse Knockout Project Status Tspan33
Protein
domains
InterPro ID Description
IPR000301 Tetraspanin, subgroup
IPR008952 Tetraspanin, EC2 domain
IPR018499 Tetraspanin
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:141291 Tamplin OJ et al., "Microarray analysis of Foxa2 mutant mouse embryoa reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives" BMC Genomics 2008;9(1):511
All references(5)
Other
accession IDs
MGI:2144063

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
02/06/2010
MGI_4.32
Web browser compatibility
The Jackson Laboratory