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Ppcs Gene Detail
 Symbol
Name
ID
Ppcs
phosphopantothenoylcysteine synthetase
MGI:1915237

Nomenclature History
Synonyms 6330579B17Rik
Genetic Map
Chromosome 4
cytoband D1
 
Mapping data( 3)
Sequence Map
Chr4:119091135-119095025 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; cattle; dog, domestic    (Mammalian Orthology)
TreeFam: TF105615
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000009426 VEGA Gene Model | MGI Sequence Detail 3891 C57BL/6J ± Kb
transcript NM_026494 RefSeq | MGI Sequence Detail 1440 C57BL/6
polypeptide Q8VDG5 UniProt | EBI | MGI Sequence Detail 311 Not Applicable
For the selected sequences
All sequences(18)
Alleles
and
phenotypes 		All alleles(5) : Targeted, knock-out(1) Gene trapped(4)
Polymorphisms SNPs within 2kb(26 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (2 annotations)
Function ligase activity, phosphopantothenate--cysteine ligase activity...
External Resources: FuncBase
Expression cDNA source data(59)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(59) cDNA(59)
Microarray probesets(3)
Pathways
coenzyme A biosynthesis
Other database
links
EC 6.3.2.5
Ensembl Gene Model ENSMUSG00000028636
DoTS DT.101395063
Consensus CDS Project CCDS18581.1
UniGene 27245
DFCI TC1576862, TC1721339
Entrez Gene 106564
VEGA Gene Model OTTMUSG00000009426
International Mouse Knockout Project Status Ppcs
Protein
domains
InterPro ID Description
IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J et al., "Functional annotation of a full-length mouse cDNA collection." Nature 2001 Feb 8;409(6821):685-90
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(5)
Other
accession IDs 		MGI:2146837, MGI:2146923
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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