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Vnn3 Gene Detail
 Symbol
Name
ID
Vnn3
vanin 3
MGI:1347055

Nomenclature History
Genetic Map
Chromosome 10
cytoband A2-B1
 
Mapping data( 3)
Sequence Map
Chr10:23571268-23589649 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; rat    (Mammalian Orthology)
Protein SuperFamily: biotinidase, eukaryotic type
TreeFam: TF323645
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000020916 VEGA Gene Model | MGI Sequence Detail 18382 C57BL/6J ± Kb
transcript NM_011979 RefSeq | MGI Sequence Detail 1811 -
polypeptide Q9QZ25 UniProt | EBI | MGI Sequence Detail 500 Not Applicable
For the selected sequences
All sequences(18)
Polymorphisms SNPs within 2kb(178 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process nitrogen compound metabolic process, pantothenate metabolic process...
Component anchored to membrane, extracellular space...
Function hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds...
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (1)    Results (3)    Tissues (3)
Theiler Stages: 4,5
  Assay Type Assays   Results
      RT-PCR 1   3
cDNA source data(6)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(8) Genomic(1) cDNA(6) Primer pair(1)
Microarray probesets(2)
Other database
links
EC 3.5.1.92
Ensembl Gene Model ENSMUSG00000020010
DoTS DT.525431
Consensus CDS Project CCDS23734.1
UniGene 27334
DFCI TC1588044
NIA Mouse Gene Index U011342
Entrez Gene 26464
VEGA Gene Model OTTMUSG00000020916
International Mouse Knockout Project Status Vnn3
Protein
domains
InterPro ID Description
IPR003010 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
IPR012101 Biotinidase, eukaryotic
Graphical View of Protein Domain Structure
References
(Earliest) J:57574 Granjeaud S et al., "An ESTs description of the new Vanin gene family conserved from fly to human." Immunogenetics 1999 Oct;49(11-12):964-72
(Latest) J:122131 Min-Oo G et al., "Complex genetic control of susceptibility to malaria: positional cloning of the Char9 locus." J Exp Med 2007 Mar 19;204(3):511-24
All references(4)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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