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Scrg1 Gene Detail
 Symbol
Name
ID
Scrg1
scrapie responsive gene 1
MGI:1328308

Nomenclature History
Genetic Map
Chromosome 8
31.0 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 5)

Sequence Map
Chr8:59934852-59956383 bp, + strand
(From Ensembl annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Scrg1 ± 2 cM)
TreeFam: TF335779
Sequences
Representative Sequences Length Strain/Species Flank
genomic ENSMUSG00000031610 Ensembl Gene Model | MGI Sequence Detail 21532 C57BL/6J ± Kb
transcript NM_009136 RefSeq | MGI Sequence Detail 700 C57BL/6
polypeptide O88745 UniProt | EBI | MGI Sequence Detail 98 Not Applicable
For the selected sequences
All sequences(17)
Alleles
and
phenotypes 		All alleles(3) : Gene trapped(3)
Polymorphisms PCR(1) SNPs within 2kb(118 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (1 annotations)
Component extracellular region
External Resources: FuncBase
Expression Literature Summary: (1 records)
Data Summary: Assays (2)    Results (17)    Tissues (10)
Theiler Stages: 20,22,23,24,26,28
  Assay Type Assays   Results
      Northern blot 2   17
cDNA source data(7)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(10) Genomic(2) cDNA(7) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000031610
DoTS DT.101245859, DT.55159863
Consensus CDS Project CCDS40342.1
UniGene 12886
DFCI TC1586927, TC1596302
Entrez Gene 20284
International Mouse Knockout Project Status Scrg1
References
(Earliest) J:47094 Dandoy-Dron F et al., "Gene expression in scrapie. Cloning of a new scrapie-responsive gene and the identification of increased levels of seven other mRNA transcripts." J Biol Chem 1998 Mar 27;273(13):7691-7
(Latest) J:89660 Dandoy-Dron F et al., "Scrg1, a novel protein of the CNS is targeted to the large dense-core vesicles in neuronal cells." Eur J Neurosci 2003 Nov;18(9):2449-59
All references(6)
Other
accession IDs 		MGI:2142768
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
Web browser compatibility 		The Jackson Laboratory