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Ppp1r10 Gene Detail
 Symbol
Name
ID
Ppp1r10
protein phosphatase 1, regulatory subunit 10
MGI:1289273

Nomenclature History
Synonyms 2610025H06Rik, D17Ertd808e, PNUTS
Genetic Map
Chromosome 17
20.5 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 2)

Sequence Map
Chr17:36053379-36069217 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Ppp1r10 ± 2 cM)
TreeFam: TF105541
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000021047 VEGA Gene Model | MGI Sequence Detail 15839 C57BL/6J ± Kb
transcript NM_175934 RefSeq | MGI Sequence Detail 4290 C57BL/6
polypeptide Q80W00 UniProt | EBI | MGI Sequence Detail 888 Not Applicable
For the selected sequences
All sequences(30)
Alleles
and
phenotypes 		All alleles(85) : Gene trapped(85)
Polymorphisms SNPs within 2kb(56 from dbSNP Build 128)   SNPs within 2kb including multiple locations(68)
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process transcription
Component nucleus
Function DNA binding, metal ion binding...
External Resources: FuncBase
Expression Literature Summary: (2 records)
Data Summary: Assays (2)    Results (28)    Tissues (20)
Theiler Stages: 2,3,4,5,24,26,28
  Assay Type Assays   Results
      RT-PCR 1   15
      RNA in situ 1   13
cDNA source data(13)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(16) cDNA(14) Primer pair(2)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000039220
NIA Mouse Gene Index U043598
Entrez Gene 52040
VEGA Gene Model OTTMUSG00000021047
International Mouse Knockout Project Status Ppp1r10
Protein
domains
InterPro ID Description
IPR000571 Zinc finger, CCCH-type
IPR003617 Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR010990 Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal
IPR014765 Transcription elongation factor, TFIIS/CRSP70, N-terminal
IPR017923 TFIIS N-terminal
Graphical View of Protein Domain Structure
References
(Earliest) J:60984 Ko MS et al., "Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development." Development 2000 Apr;127(8):1737-49
(Latest) J:135820 Rose M et al., "PNUTS forms a trimeric protein complex with GABA(C) receptors and protein phosphatase 1." Mol Cell Neurosci 2008 Apr;37(4):808-19
All references(10)
Other
accession IDs 		MGI:1913700
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
Web browser compatibility 		The Jackson Laboratory