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Klra1 Gene Detail
 Symbol
Name
ID
Klra1
killer cell lectin-like receptor, subfamily A, member 1
MGI:101907

Nomenclature History
Synonyms Ly49A, Ly49o129
Genetic Map
Chromosome 6
62.72 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 20)

Sequence Map
Chr6:130313936-130336892 bp, - strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
Protein SuperFamily: natural killer receptor Ly49
TreeFam: TF336674
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000022866 VEGA Gene Model | MGI Sequence Detail 22957 C57BL/6J ± Kb
transcript NM_016659 RefSeq | MGI Sequence Detail 1667 C57BL/6
polypeptide P20937 UniProt | EBI | MGI Sequence Detail 262 Not Applicable
For the selected sequences
All sequences(30)
Polymorphisms All PCR and RFLP(4) : PCR(2) RFLP(2) SNPs within 2kb(396 from dbSNP Build 128)   SNPs within 2kb including multiple locations(402)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process cell adhesion
Component external side of plasma membrane, integral to membrane...
Function binding, protein binding...
External Resources: FuncBase
Expression cDNA source data(4)
External Resources: GEO  ArrayExpress 
Molecular
reagents 		All nucleic(35) Genomic(24) cDNA(6) Primer pair(5)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000079853
Consensus CDS Project CCDS20602.1
PDB 1QO3
Entrez Gene 16627
VEGA Gene Model OTTMUSG00000022866
International Mouse Knockout Project Status Klra1
Protein
domains
InterPro ID Description
IPR001304 C-type lectin
IPR013600 Ly49-like N-terminal
IPR016186 C-type lectin-like
IPR016187 C-type lectin fold
Graphical View of Protein Domain Structure
References
(Earliest) J:16721 Yokoyama WM et al., "A murine T lymphocyte antigen belongs to a supergene family of type II integral membrane proteins." J Immunol 1989 Aug 15;143(4):1379-86
(Latest) J:146767 Chalifour A et al., "A Role for cis Interaction between the Inhibitory Ly49A receptor and MHC class I for natural killer cell education." Immunity 2009 Mar;30(3):337-47
All references(46)
Other
accession IDs 		MGD-MRK-18734
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
Web browser compatibility 		The Jackson Laboratory