About   Help   FAQ
Mssq9C57BL/6JJcl
QTL Variant Detail

Nomenclature
QTL variant: Mssq9C57BL/6JJcl
Name: mandible size and shape QTL 9; C57BL/6JJcl
MGI ID: MGI:3832893
QTL: Mssq9   Location: unknown     Genetic Position: Chr9, cM position of peak correlated region/allele: Syntenic
Variant
origin
Strain of Specimen: C57BL/6JJcl
Variant
description
Allele Type:   QTL
Mutation:   Undefined
    This allele confers increased mandible size compared to KK/TaJcl. (J:143893)
Phenotypes
Loading...
View phenotypes for all genotypes (concatenated display).
Notes

Mapping and Phenotype information for this QTL, its variants and associated markers

(J:143893)
Genetic loci affecting mandible size and shape were mapped using 190 mice from a (C57BL/6JJcl x KK-A<y>/TaJcl)F2 intercross. Of the F2 population, 97 animals had the A<y>/a genotype and 93 animals had the a/a genotype. Thirteen measurements taken from the right mandible and 3 principal components were assessed in experimental animals 6-7 months of age. Parental strain KK-A<y>/TaJcl displays increased values across most of the 13 mandible measurements compared to parental strain C57BL/6JJcl. The A<y> allele increases mandible size in KK animals compared to the a allele. A panel of 100 polymorphic markers was used for linkage analysis.

Mssq9 (mandible size and shape QTL 9) mapped to 61 cM on mouse Chromosome 9 near D9Mit212 in the combined F2 population.C57BL/6JJcl-derived alleles at Mssq9 confer increased mandible size for two mandible measurements. Mssq9 also displays suggestive linkage to mandible size in the a/a F2 group (LOD=2.3) and the A<y>/a F2 group (LOD=2.6).

References
Original: J:143893 Suto J, "Identification of multiple quantitative trait loci affecting the size and shape of the mandible in mice." Mamm Genome 2009 Jan;20(1):1-13
All: 1 reference(s)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/08/2013
MGI 5.13
The Jackson Laboratory