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GO Annotations Graph
 Symbol
Name
ID
Scn9a
sodium channel, voltage-gated, type IX, alpha
MGI:107636

GO annotations  (Text View)    (Tabular View)

A table of the annotations represented in this image is provided below.
  • Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
  • Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
  • Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
  • Graph generated Wed Jul 23 12:17:05 2014.

CategoryGO IDClassification TermEvidenceReference
Molecular FunctionGO:0005216ion channel activityIEAJ:72247
Molecular FunctionGO:0005272sodium channel activityIEAJ:60000
Molecular FunctionGO:0031402sodium ion bindingISOJ:155856
Molecular FunctionGO:0005244voltage-gated ion channel activityIEAJ:60000
Molecular FunctionGO:0005248voltage-gated sodium channel activityISOJ:155856
Molecular FunctionGO:0005248voltage-gated sodium channel activityIBAJ:161428
Cellular ComponentGO:0016021integral component of membraneIEAJ:60000
Cellular ComponentGO:0016020membraneIEAJ:60000
Cellular ComponentGO:0016020membraneIEAJ:72247
Cellular ComponentGO:0005886plasma membraneIBAJ:161428
Cellular ComponentGO:0001518voltage-gated sodium channel complexISOJ:155856
Biological ProcessGO:0048266behavioral response to painIMPJ:92442
Biological ProcessGO:0006954inflammatory responseIMPJ:92442
Biological ProcessGO:0006811ion transportIEAJ:60000
Biological ProcessGO:0006811ion transportIEAJ:72247
Biological ProcessGO:0086010membrane depolarization during action potentialIBAJ:161428
Biological ProcessGO:0019228neuronal action potentialISOJ:155856
Biological ProcessGO:0019228neuronal action potentialIBAJ:161428
Biological ProcessGO:0009791post-embryonic developmentIMPJ:92442
Biological ProcessGO:0034765regulation of ion transmembrane transportIBAJ:161428
Biological ProcessGO:0009636response to toxic substanceIDAJ:101093
Biological ProcessGO:0035725sodium ion transmembrane transportISOJ:155856
Biological ProcessGO:0035725sodium ion transmembrane transportIBAJ:161428
Biological ProcessGO:0006814sodium ion transportIEAJ:60000
Biological ProcessGO:0006814sodium ion transportIEAJ:72247
Biological ProcessGO:0055085transmembrane transportIEAJ:72247
Biological ProcessGO:0006810transportIEAJ:60000

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment
  IAS Inferred from ancestral seqeuence
  IBA Inferred from biological aspect of ancestor
  IBD Inferred from biological aspect of descendant
  IC Inferred by curator
  IDA Inferred from direct assay
  IEA Inferred from electronic annotation
  IEP Inferred from expression pattern
  IGC Inferred from genomic context
  IGI Inferred from genetic interaction
  IKR Inferred from key residues
  IMP Inferred from mutant phenotype
  IMR Inferred from missing residues
  IPI Inferred from physical interaction
  IRD Inferred from rapid divergence
  ISA Inferred from sequence alignment
  ISM Inferred from sequence model
  ISO Inferred from sequence orthology
  ISS Inferred from sequence or structural similarity
  NAS Non-traceable Author Statement
  ND No biological data available
  RCA Reviewed computational analysis
  TAS Traceable author statement
  NR Obsolete Evidence Code: Not Recorded

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory