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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PHF1 HGNC:8919 (HGNC)
5252 (Entrez Gene)
602881 (OMIM)
PHF1 (Alliance of Genome Resources)
Chr6 p21.32 Chr6:33410399-33416453 (+)
GRCh38
O43189 (UniProt | EBI)
NM_002636 (RefSeq)
mouse Phf1 MGI:98647 (MGI)
21652 (Entrez Gene)
Gene Tree
Phf1 (Alliance of Genome Resources)
Chr17 13.6 cM Chr17:27152101-27156882 (+)
GRCm39
21652 (NCBI Gene Model)
Q9Z1B8 (UniProt | EBI)
NM_009343 (RefSeq)
rat Phf1 RGD:1303205 (Rat Genome Database)
294287 (Entrez Gene)
Phf1 (Alliance of Genome Resources)
Chr20 p12 NP_001401671 (RefSeq)
NM_001414742 (RefSeq)
zebrafish phf1 ZDB-GENE-100922-277 (Zebrafish Model Organism Database)
100334345 (Entrez Gene)
phf1 (Alliance of Genome Resources)
Chr16 XP_002665057 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory