PTPRC Vertebrate HGNC

Vertebrate Homology

Source

Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	PTPRC	HGNC:9666 (HGNC) 5788 (Entrez Gene) 151460 (OMIM) PTPRC (Alliance of Genome Resources)	Chr1 q31.3-q32.1	Chr1:198638457-198757476 (+) GRCh38	multiple sclerosis primary immunodeficiency disease severe combined immunodeficiency	P08575 (UniProt \| EBI) NM_080922 (RefSeq)
mouse	Ptprc	MGI:97810 (MGI) 19264 (Entrez Gene) Gene Tree Ptprc (Alliance of Genome Resources)	Chr1 60.73 cM	Chr1:137990599-138103446 (-) GRCm39	systemic lupus erythematosus	ENSMUSG00000026395 (Ensembl Gene Model) ENSMUSP00000138350 (Ensembl) ENSMUST00000183301 (Ensembl)
rat	Ptprc	RGD:3451 (Rat Genome Database) 24699 (Entrez Gene) Ptprc (Alliance of Genome Resources)	Chr13 q13			P04157 (UniProt \| EBI) NM_138507 (RefSeq)
zebrafish	ptprc	ZDB-GENE-050208-585 (Zebrafish Model Organism Database) 559154 (Entrez Gene) ptprc (Alliance of Genome Resources)	Chr22			XP_021325271 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/09/2024 MGI 6.23