OCA2 Vertebrate HGNC

Vertebrate Homology

Source

Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	OCA2	HGNC:8101 (HGNC) 4948 (Entrez Gene) 611409 (OMIM) OCA2 (Alliance of Genome Resources)	Chr15 q12-q13.1	Chr15:27719008-28099315 (-) GRCh38	actinic keratosis basal cell carcinoma oculocutaneous albinism type II pigmentation disease skin melanoma squamous cell carcinoma	Q04671 (UniProt \| EBI) NM_000275 (RefSeq)
mouse	Oca2	MGI:97454 (MGI) 18431 (Entrez Gene) Gene Tree Oca2 (Alliance of Genome Resources)	Chr7 33.44 cM	Chr7:55889508-56186266 (+) GRCm39	oculocutaneous albinism	ENSMUSG00000030450 (Ensembl Gene Model) ENSMUSP00000032633 (Ensembl) ENSMUST00000032633 (Ensembl)
rat	Oca2	RGD:2318412 (Rat Genome Database) 100365773 (Entrez Gene) Oca2 (Alliance of Genome Resources)	Chr1			NP_001258422 (RefSeq) NM_001271493 (RefSeq)
zebrafish	oca2	ZDB-GENE-070718-4 (Zebrafish Model Organism Database) 567419 (Entrez Gene) oca2 (Alliance of Genome Resources)	Chr6			XP_695807 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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