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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NOTCH1 HGNC:7881 (HGNC)
4851 (Entrez Gene)
190198 (OMIM)
NOTCH1 (Alliance of Genome Resources)
Chr9 q34.3 Chr9:136494433-136546048 (-)
GRCh38
Adams-Oliver syndrome
adult T-cell leukemia/lymphoma
aortic valve disease 1
congenital heart disease
P46531 (UniProt | EBI)
NM_017617 (RefSeq)
mouse Notch1 MGI:97363 (MGI)
18128 (Entrez Gene)
Gene Tree
Notch1 (Alliance of Genome Resources)
Chr2 18.91 cM Chr2:26347914-26393834 (-)
GRCm39
18128 (NCBI Gene Model)
Q01705 (UniProt | EBI)
NM_008714 (RefSeq)
rat Notch1 RGD:3187 (Rat Genome Database)
25496 (Entrez Gene)
Notch1 (Alliance of Genome Resources)
Chr3 p13 Q07008 (UniProt | EBI)
NM_001105721 (RefSeq)
zebrafish notch1a ZDB-GENE-990415-173 (Zebrafish Model Organism Database)
30718 (Entrez Gene)
notch1a (Alliance of Genome Resources)
Chr21 P46530 (UniProt | EBI)
NM_131441 (RefSeq)
notch1b ZDB-GENE-990415-183 (Zebrafish Model Organism Database)
794892 (Entrez Gene)
notch1b (Alliance of Genome Resources)
Chr5 NP_571377 (RefSeq)
NM_131302 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/09/2024
MGI 6.23
The Jackson Laboratory