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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HLA-E HGNC:4962 (HGNC)
3133 (Entrez Gene)
143010 (OMIM)
HLA-E (Alliance of Genome Resources)
Chr6 p22.1 Chr6:30489406-30494205 (+)
GRCh38.p7
HLA-F HGNC:4963 (HGNC)
3134 (Entrez Gene)
143110 (OMIM)
HLA-F (Alliance of Genome Resources)
Chr6 p22.1 Chr6:29723340-29740355 (+)
GRCh38.p7
HLA-G HGNC:4964 (HGNC)
3135 (Entrez Gene)
142871 (OMIM)
HLA-G (Alliance of Genome Resources)
Chr6 p22.1 Chr6:29826967-29831130 (+)
GRCh38.p7
asthma
mouse H2-T23 MGI:95957 (MGI)
15040 (Entrez Gene)
Gene Tree
H2-T23 (Alliance of Genome Resources)
Chr17 18.86 cM Chr17:36340869-36343593 (-)
GRCm39
15040 (NCBI Gene Model)
rat RT1-S3 RGD:735037 (Rat Genome Database)
294228 (Entrez Gene)
RT1-S3 (Alliance of Genome Resources)
Chr20 p12
zebrafish mhc1uba ZDB-GENE-990415-145 (Zebrafish Model Organism Database)
30757 (Entrez Gene)
mhc1uba (Alliance of Genome Resources)
Chr19
mhc1uma ZDB-GENE-140820-1 (Zebrafish Model Organism Database)
101883648 (Entrez Gene)
mhc1uma (Alliance of Genome Resources)
Chr22
mhc1zba ZDB-GENE-040426-2149 (Zebrafish Model Organism Database)
791453 (Entrez Gene)
mhc1zba (Alliance of Genome Resources)
Chr1
mhc1zca ZDB-GENE-070424-4 (Zebrafish Model Organism Database)
556341 (Entrez Gene)
mhc1zca (Alliance of Genome Resources)
Chr1
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/10/2022
MGI 6.19
The Jackson Laboratory