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Vertebrate Homology
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HLA-DRA HGNC:4947 (HGNC)
3122 (Entrez Gene)
142860 (OMIM)
HLA-DRA (Alliance of Genome Resources)
Chr6 p21.32 Chr6:32439842-32445046 (+)
allergic disease
autoimmune thyroiditis
late onset Parkinson's disease
multiple sclerosis
Parkinson's disease
P01903 (UniProt | EBI)
NM_019111 (RefSeq)
mouse H2-Ea MGI:95900 (MGI)
100504404 (Entrez Gene)
Gene Tree
H2-Ea (Alliance of Genome Resources)
Chr17 17.98 cM Chr17:34560933-34563619 (-)
ENSMUSG00000036322 (Ensembl Gene Model)
ENSMUSP00000157668 (Ensembl)
ENSMUST00000235482 (Ensembl)
rat RT1-Da RGD:1593283 (Rat Genome Database)
294269 (Entrez Gene)
RT1-Da (Alliance of Genome Resources)
Chr20 p12 NP_001008847 (RefSeq)
NM_001008847 (RefSeq)
zebrafish mhc2d8.35a1 ZDB-GENE-131121-38 (Zebrafish Model Organism Database)
795595 (Entrez Gene)
mhc2d8.35a1 (Alliance of Genome Resources)
Chr8 XP_009302401 (RefSeq)
mhc2d8.37a1 ZDB-GENE-091204-401 (Zebrafish Model Organism Database)
103908641 (Entrez Gene)
mhc2d8.37a1 (Alliance of Genome Resources)
Chr8 XP_005167290 (RefSeq)
mhc2d8.46a ZDB-GENE-081105-52 (Zebrafish Model Organism Database)
571282 (Entrez Gene)
mhc2d8.46a (Alliance of Genome Resources)
Chr8 XP_699949 (RefSeq)
mhc2dga ZDB-GENE-030616-505 (Zebrafish Model Organism Database)
368614 (Entrez Gene)
mhc2dga (Alliance of Genome Resources)
Chr8 NP_001007206 (RefSeq)
NM_001007205 (RefSeq)
si:busm1-194e12.8 ZDB-GENE-030616-323 (Zebrafish Model Organism Database)
368816 (Entrez Gene)
si:busm1-194e12.8 (Alliance of Genome Resources)
Chr8 NP_001007430 (RefSeq)
NM_001007429 (RefSeq)
zgc:123107 ZDB-GENE-051113-192 (Zebrafish Model Organism Database)
641415 (Entrez Gene)
zgc:123107 (Alliance of Genome Resources)
Chr4 NP_001032481 (RefSeq)
NM_001037404 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.21
The Jackson Laboratory