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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human APP HGNC:620 (HGNC)
351 (Entrez Gene)
104760 (OMIM)
APP (Alliance of Genome Resources)
Chr21 q21.3 Chr21:25880535-26171128 (-)
GRCh38
Alzheimer's disease
Alzheimer's disease 1
APP-related cerebral amyloid angiopathy
cognitive disorder
traumatic brain injury
visual epilepsy
P05067 (UniProt | EBI)
NM_001136130 (RefSeq)
mouse App MGI:88059 (MGI)
11820 (Entrez Gene)
Gene Tree
App (Alliance of Genome Resources)
Chr16 46.92 cM Chr16:84751236-84972187 (-)
GRCm39
Alzheimer's disease
11820 (NCBI Gene Model)
P12023 (UniProt | EBI)
NM_001198823 (RefSeq)
rat App RGD:2139 (Rat Genome Database)
54226 (Entrez Gene)
App (Alliance of Genome Resources)
Chr11 q11 P08592 (UniProt | EBI)
NM_019288 (RefSeq)
zebrafish appa ZDB-GENE-000616-13 (Zebrafish Model Organism Database)
58083 (Entrez Gene)
appa (Alliance of Genome Resources)
Chr1 NP_571639 (RefSeq)
NM_131564 (RefSeq)
appb ZDB-GENE-020220-1 (Zebrafish Model Organism Database)
170846 (Entrez Gene)
appb (Alliance of Genome Resources)
Chr9 NP_690842 (RefSeq)
NM_152886 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory