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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human POMT1 HGNC:9202 (HGNC)
10585 (Entrez Gene)
607423 (OMIM)
POMT1 (MyGene.info)
POMT1 (Alliance of Genome Resources)
Chr9 q34.13 Chr9:131502895-131523806 (+)
GRCh38.p7
autosomal recessive limb-girdle muscular dystrophy type 2K
congenital muscular dystrophy-dystroglycanopathy type A1
muscular dystrophy-dystroglycanopathy
Q9Y6A1 (UniProt | EBI)
NM_001374695 (RefSeq)
mouse Pomt1 MGI:2138994 (MGI)
99011 (Entrez Gene)
Gene Tree
Pomt1 (Alliance of Genome Resources)
Chr2 22.09 cM Chr2:32126652-32145017 (+)
GRCm39
muscular dystrophy-dystroglycanopathy
99011 (NCBI Gene Model)
Q8R2R1 (UniProt | EBI)
NM_145145 (RefSeq)
rat Pomt1 RGD:620078 (Rat Genome Database)
84430 (Entrez Gene)
Pomt1 (Alliance of Genome Resources)
Chr3 p12 Q99PR0 (UniProt | EBI)
NM_053406 (RefSeq)
zebrafish pomt1 ZDB-GENE-060929-966 (Zebrafish Model Organism Database)
569769 (Entrez Gene)
pomt1 (Alliance of Genome Resources)
Chr5 F1QF89 (UniProt | EBI)
NM_001048067 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/23/2021
MGI 6.17
The Jackson Laboratory