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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LSM12 HGNC:26407 (HGNC)
124801 (Entrez Gene)
611793 (OMIM)
LSM12 (Alliance of Genome Resources)
Chr17 q21.31 Chr17:44034328-44067619 (-)
GRCh38
Q3MHD2 (UniProt | EBI)
NM_001369486 (RefSeq)
mouse Lsm12 MGI:1919592 (MGI)
268490 (Entrez Gene)
Gene Tree
Lsm12 (Alliance of Genome Resources)
Chr11 65.6 cM Chr11:102053323-102076122 (-)
GRCm39
ENSMUSG00000020922 (Ensembl Gene Model)
ENSMUSP00000021297 (Ensembl)
ENSMUST00000021297 (Ensembl)
rat Lsm12 RGD:1309441 (Rat Genome Database)
287731 (Entrez Gene)
Lsm12 (Alliance of Genome Resources)
Chr10 q32.1 NP_001099313 (RefSeq)
NM_001105843 (RefSeq)
zebrafish lsm12a ZDB-GENE-040516-12 (Zebrafish Model Organism Database)
407986 (Entrez Gene)
lsm12a (Alliance of Genome Resources)
Chr3 Q6NSN1 (UniProt | EBI)
NM_214817 (RefSeq)
lsm12b ZDB-GENE-040426-2164 (Zebrafish Model Organism Database)
406422 (Entrez Gene)
lsm12b (Alliance of Genome Resources)
Chr12 Q6PBA2 (UniProt | EBI)
NM_213148 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory