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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PNKP HGNC:9154 (HGNC)
11284 (Entrez Gene)
605610 (OMIM)
PNKP (Alliance of Genome Resources)
Chr19 q13.33 Chr19:49859882-49878351 (-)
GRCh38
ataxia-oculomotor apraxia type 4
Charcot-Marie-Tooth disease type 2B2
microcephaly, seizures, and developmental delay
Q96T60 (UniProt | EBI)
NM_007254 (RefSeq)
mouse Pnkp MGI:1891698 (MGI)
59047 (Entrez Gene)
Gene Tree
Pnkp (Alliance of Genome Resources)
Chr7 28.94 cM Chr7:44506563-44512416 (+)
GRCm39
ENSMUSG00000002963 (Ensembl Gene Model)
ENSMUSP00000103508 (Ensembl)
ENSMUST00000107876 (Ensembl)
rat Pnkp RGD:1303331 (Rat Genome Database)
308576 (Entrez Gene)
Pnkp (Alliance of Genome Resources)
Chr1 q22 NP_001004259 (RefSeq)
NM_001004259 (RefSeq)
zebrafish pnkp ZDB-GENE-061013-433 (Zebrafish Model Organism Database)
569462 (Entrez Gene)
pnkp (Alliance of Genome Resources)
Chr15 NP_001071046 (RefSeq)
NM_001077578 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory