CLDN5 Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/16/2024 MGI 6.23

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	CLDN5	HGNC:2047 (HGNC) 7122 (Entrez Gene) 602101 (OMIM) CLDN5 (Alliance of Genome Resources)	Chr22 q11.21	Chr22:19523024-19527545 (-) GRCh38	schizophrenia	O00501 (UniProt \| EBI) NM_001363066 (RefSeq)
mouse	Cldn5	MGI:1276112 (MGI) 12741 (Entrez Gene) Gene Tree Cldn5 (Alliance of Genome Resources)	Chr16 11.63 cM	Chr16:18595597-18597012 (+) GRCm39		12741 (NCBI Gene Model) O54942 (UniProt \| EBI) NM_013805 (RefSeq)
rat	Cldn5	RGD:68431 (Rat Genome Database) 65131 (Entrez Gene) Cldn5 (Alliance of Genome Resources)	Chr11 q23			Q9JKD6 (UniProt \| EBI) NM_031701 (RefSeq)
zebrafish	cldn5a	ZDB-GENE-040426-2442 (Zebrafish Model Organism Database) 406559 (Entrez Gene) cldn5a (Alliance of Genome Resources)	Chr8			NP_998439 (RefSeq) NM_213274 (RefSeq)
zebrafish	cldn5b	ZDB-GENE-041010-140 (Zebrafish Model Organism Database) 450023 (Entrez Gene) cldn5b (Alliance of Genome Resources)	Chr10			NP_001006044 (RefSeq) NM_001006044 (RefSeq)