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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PROM1 HGNC:9454 (HGNC)
8842 (Entrez Gene)
604365 (OMIM)
PROM1 (Alliance of Genome Resources)
Chr4 p15.32 Chr4:15963076-16084378 (-)
GRCh38
cone-rod dystrophy 12
retinal macular dystrophy
retinitis pigmentosa 41
O43490 (UniProt | EBI)
NM_001145852 (RefSeq)
mouse Prom1 MGI:1100886 (MGI)
19126 (Entrez Gene)
Gene Tree
Prom1 (Alliance of Genome Resources)
Chr5 23.97 cM Chr5:44150962-44259374 (-)
GRCm39
retinitis pigmentosa 41
ENSMUSG00000029086 (Ensembl Gene Model)
ENSMUSP00000073751 (Ensembl)
ENSMUST00000074113 (Ensembl)
rat Prom1 RGD:69367 (Rat Genome Database)
60357 (Entrez Gene)
Prom1 (Alliance of Genome Resources)
Chr14 q21 NP_001103607 (RefSeq)
NM_021751 (RefSeq)
zebrafish prom1a ZDB-GENE-030131-1577 (Zebrafish Model Organism Database)
322857 (Entrez Gene)
prom1a (Alliance of Genome Resources)
Chr14 Q9W735 (UniProt | EBI)
NM_001115143 (RefSeq)
prom1b ZDB-GENE-031003-1 (Zebrafish Model Organism Database)
378834 (Entrez Gene)
prom1b (Alliance of Genome Resources)
Chr1 NP_932337 (RefSeq)
NM_198071 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory