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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PDPN HGNC:29602 (HGNC)
10630 (Entrez Gene)
608863 (OMIM)
PDPN (Alliance of Genome Resources)
Chr1 p36.21 Chr1:13583465-13617957 (+)
GRCh38
Q86YL7 (UniProt | EBI)
NM_006474 (RefSeq)
mouse Pdpn MGI:103098 (MGI)
14726 (Entrez Gene)
Gene Tree
Pdpn (Alliance of Genome Resources)
Chr4 77.29 cM Chr4:142994001-143026134 (-)
GRCm39
ENSMUSG00000028583 (Ensembl Gene Model)
ENSMUSP00000030317 (Ensembl)
ENSMUST00000030317 (Ensembl)
rat Pdpn RGD:61819 (Rat Genome Database)
54320 (Entrez Gene)
Pdpn (Alliance of Genome Resources)
Chr5 q36 Q64294 (UniProt | EBI)
NM_019358 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory