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Vertebrate Homology
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPP1CA HGNC:9281 (HGNC)
5499 (Entrez Gene)
176875 (OMIM)
PPP1CA (MyGene.info)
PPP1CA (Alliance of Genome Resources)
Chr11 q13.2 Chr11:67398181-67401905 (-)
P62136 (UniProt | EBI)
NM_002708 (RefSeq)
mouse Ppp1ca MGI:103016 (MGI)
19045 (Entrez Gene)
Gene Tree
Ppp1ca (Alliance of Genome Resources)
Chr19 3.89 cM Chr19:4242173-4245418 (+)
19045 (NCBI Gene Model)
P62137 (UniProt | EBI)
NM_031868 (RefSeq)
rat Ppp1ca RGD:3375 (Rat Genome Database)
24668 (Entrez Gene)
Ppp1ca (Alliance of Genome Resources)
Chr1 q43 P62138 (UniProt | EBI)
NM_031527 (RefSeq)
zebrafish ppp1caa ZDB-GENE-040516-3 (Zebrafish Model Organism Database)
407980 (Entrez Gene)
ppp1caa (Alliance of Genome Resources)
Chr3 NP_999976 (RefSeq)
NM_214811 (RefSeq)
ppp1cab ZDB-GENE-030131-5512 (Zebrafish Model Organism Database)
327301 (Entrez Gene)
ppp1cab (Alliance of Genome Resources)
Chr12 NP_997875 (RefSeq)
NM_212710 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.17
The Jackson Laboratory