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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TBX5 HGNC:11604 (HGNC)
6910 (Entrez Gene)
601620 (OMIM)
TBX5 (Alliance of Genome Resources)
Chr12 q24.21 Chr12:114353911-114408442 (-)
GRCh38
Holt-Oram syndrome
Q99593 (UniProt | EBI)
NM_080717 (RefSeq)
mouse Tbx5 MGI:102541 (MGI)
21388 (Entrez Gene)
Gene Tree
Tbx5 (Alliance of Genome Resources)
Chr5 60.42 cM Chr5:119970733-120023284 (+)
GRCm39
Holt-Oram syndrome
ENSMUSG00000018263 (Ensembl Gene Model)
ENSMUSP00000018407 (Ensembl)
ENSMUST00000018407 (Ensembl)
rat Tbx5 RGD:1305702 (Rat Genome Database)
304514 (Entrez Gene)
Tbx5 (Alliance of Genome Resources)
Chr12 q16 Q5I2P1 (UniProt | EBI)
NM_001009964 (RefSeq)
zebrafish tbx5a ZDB-GENE-991124-7 (Zebrafish Model Organism Database)
30071 (Entrez Gene)
tbx5a (Alliance of Genome Resources)
Chr5 Q9IAK8 (UniProt | EBI)
NM_130915 (RefSeq)
tbx5b ZDB-GENE-060601-2 (Zebrafish Model Organism Database)
100004161 (Entrez Gene)
tbx5b (Alliance of Genome Resources)
Chr5 NP_001185700 (RefSeq)
NM_001198771 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory