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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human POU5F1 HGNC:9221 (HGNC)
5460 (Entrez Gene)
164177 (OMIM)
POU5F1 (Alliance of Genome Resources)
Chr6 p21.33 Chr6:31164337-31180731 (-)
GRCh38
embryonal carcinoma
seminoma
Q01860 (UniProt | EBI)
NM_002701 (RefSeq)
POU5F1B HGNC:9223 (HGNC)
5462 (Entrez Gene)
615739 (OMIM)
POU5F1B (Alliance of Genome Resources)
Chr8 q24.21 Chr8:127322183-127420066 (+)
GRCh38
Q06416 (UniProt | EBI)
NM_001395745 (RefSeq)
mouse Pou5f1 MGI:101893 (MGI)
18999 (Entrez Gene)
Gene Tree
Pou5f1 (Alliance of Genome Resources)
Chr17 18.69 cM Chr17:35816929-35821674 (+)
GRCm39
18999 (NCBI Gene Model)
P20263 (UniProt | EBI)
NM_013633 (RefSeq)
rat Pou5f1 RGD:1359491 (Rat Genome Database)
294562 (Entrez Gene)
Pou5f1 (Alliance of Genome Resources)
Chr20 NP_001009178 (RefSeq)
NM_001009178 (RefSeq)
zebrafish pou5f3 ZDB-GENE-980526-485 (Zebrafish Model Organism Database)
30333 (Entrez Gene)
pou5f3 (Alliance of Genome Resources)
Chr21 Q90270 (UniProt | EBI)
NM_131112 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory