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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
124236

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human KCNF1 HGNC:6246 (HGNC)
3754 (Entrez Gene)
603787 (OMIM)
Chr2 p25 Chr2:10911937-10914225 (+)
GRCh38
Q9H3M0 (UniProt | EBI)
NM_002236 (RefSeq)
mouse Kcnf1 MGI:2687399 (MGI)
382571 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 8.04 cM Chr12:17172100-17176888 (-)
GRCm38
OTTMUSG00000037668 (VEGA)
OTTMUSP00000054524 (VEGA)
OTTMUST00000097263 (VEGA)
rat Kcnf1 298908 (Entrez Gene)
Chr6 q16 NP_001162575 (RefSeq)
NM_001169104 (RefSeq)
chimpanzee KCNF1 470495 (Entrez Gene)
Chr2A XP_009440307 (RefSeq)
rhesus macaque KCNF1 696595 (Entrez Gene)
Chr13 NP_001244508 (RefSeq)
NM_001257579 (RefSeq)
cattle KCNF1 505879 (Entrez Gene)
Chr11 NP_001091456 (RefSeq)
NM_001097987 (RefSeq)
dog KCNF1 482968 (Entrez Gene)
Chr17 XP_540081 (RefSeq)
chicken KCNF1 428652 (Entrez Gene)
Chr3 XP_426210 (RefSeq)
western clawed frog kcnf1 100124998 (Entrez Gene)
ChrUN NP_001096396 (RefSeq)
NM_001102926 (RefSeq)
zebrafish kcnf1b 100334378 (Entrez Gene)
Chr13 XP_005157014 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory