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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
69375

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human STX1B HGNC:18539 (HGNC)
112755 (Entrez Gene)
601485 (OMIM)
Chr16 p11.2 Chr16:30989256-31010508 (-)
GRCh38
P61266 (UniProt | EBI)
NM_052874 (RefSeq)
mouse Stx1b MGI:1930705 (MGI)
56216 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 69.75 cM Chr7:127803900-127824549 (-)
GRCm38
OTTMUSG00000031121 (VEGA)
OTTMUSP00000040686 (VEGA)
OTTMUST00000077102 (VEGA)
rat Stx1b 24923 (Entrez Gene)
Chr1 q36 P61265 (UniProt | EBI)
NM_012700 (RefSeq)
chimpanzee STX1B 742353 (Entrez Gene)
Chr16 XP_001145497 (RefSeq)
rhesus macaque LOC714251 714251 (Entrez Gene)
Chr20 XP_001103901 (RefSeq)
cattle STX1B 282377 (Entrez Gene)
Chr25 P61267 (UniProt | EBI)
NM_174618 (RefSeq)
dog STX1B 489918 (Entrez Gene)
Chr6 XP_005621349 (RefSeq)
zebrafish stx1b 58038 (Entrez Gene)
Chr19 NP_571598 (RefSeq)
NM_131523 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory